Global Biogeography of the Soil Virosphere
ABSTRACT Historically neglected by microbial ecologists, soil viruses are now thought to be critical to global biogeochemical cycles. However, our understanding of their global distribution, activities, and interactions with the soil microbiome remains limited. Here, we present the Global Soil Virus (GSV) Atlas, a comprehensive dataset from 2,953 soil metagenomes that is comprised of 616,935 uncultivated viral genomes (UViGs) and 38,508 unique viral operational taxonomic units (vOTUs). Rarefaction curves from the GSV Atlas indicate that most soil viral diversity remains unexplored, further underscored by high spatial turnover and low rates of shared vOTUs across samples. By examining genes associated with biogeochemical functions, we also demonstrate the viral potential to impact soil carbon and nutrient cycling. This study represents the most extensive characterization of soil viral diversity to date and provides a foundation for developing testable hypotheses regarding the role of the virosphere in the soil microbiome and global biogeochemistry..
| Medienart: |
|
|---|
Preprint| Erscheinungsjahr: |
2023 |
|---|---|
| Erschienen: |
2023 |
| Enthalten in: |
bioRxiv.org - (2023) vom: 22. Dez. Zur Gesamtaufnahme - year:2023 |
|---|
| Sprache: |
Englisch |
|---|
| Beteiligte Personen: |
Graham, Emily B. [VerfasserIn] |
|---|
| Links: |
Volltext [kostenfrei] |
|---|
| Themen: |
|---|
| doi: |
10.1101/2023.11.02.565391 |
|---|
| funding: |
|
|---|---|
| Förderinstitution / Projekttitel: |
|
| PPN (Katalog-ID): |
XBI041434943 |
|---|
| LEADER | 01000caa a22002652 4500 | ||
|---|---|---|---|
| 001 | XBI041434943 | ||
| 003 | DE-627 | ||
| 005 | 20231223090624.0 | ||
| 007 | cr uuu---uuuuu | ||
| 008 | 231106s2023 xx |||||o 00| ||eng c | ||
| 024 | 7 | |a 10.1101/2023.11.02.565391 |2 doi | |
| 035 | |a (DE-627)XBI041434943 | ||
| 035 | |a (biorXiv)10.1101/2023.11.02.565391 | ||
| 040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
| 041 | |a eng | ||
| 100 | 1 | |a Graham, Emily B. |e verfasserin |0 (orcid)0000-0002-4623-7076 |4 aut | |
| 245 | 1 | 0 | |a Global Biogeography of the Soil Virosphere |
| 264 | 1 | |c 2023 | |
| 336 | |a Text |b txt |2 rdacontent | ||
| 337 | |a Computermedien |b c |2 rdamedia | ||
| 338 | |a Online-Ressource |b cr |2 rdacarrier | ||
| 520 | |a ABSTRACT Historically neglected by microbial ecologists, soil viruses are now thought to be critical to global biogeochemical cycles. However, our understanding of their global distribution, activities, and interactions with the soil microbiome remains limited. Here, we present the Global Soil Virus (GSV) Atlas, a comprehensive dataset from 2,953 soil metagenomes that is comprised of 616,935 uncultivated viral genomes (UViGs) and 38,508 unique viral operational taxonomic units (vOTUs). Rarefaction curves from the GSV Atlas indicate that most soil viral diversity remains unexplored, further underscored by high spatial turnover and low rates of shared vOTUs across samples. By examining genes associated with biogeochemical functions, we also demonstrate the viral potential to impact soil carbon and nutrient cycling. This study represents the most extensive characterization of soil viral diversity to date and provides a foundation for developing testable hypotheses regarding the role of the virosphere in the soil microbiome and global biogeochemistry. | ||
| 650 | 4 | |a Biology |7 (dpeaa)DE-84 | |
| 650 | 4 | |a 570 |7 (dpeaa)DE-84 | |
| 700 | 1 | |a Camargo, Antonio P. |0 (orcid)0000-0003-3913-2484 |4 aut | |
| 700 | 1 | |a Wu, Ruonan |0 (orcid)0000-0001-9466-4462 |4 aut | |
| 700 | 1 | |a Neches, Russell Y. |0 (orcid)0000-0002-2055-8381 |4 aut | |
| 700 | 1 | |a Nolan, Matt |0 (orcid)0000-0002-9532-0853 |4 aut | |
| 700 | 1 | |a Paez-Espino, David |0 (orcid)0000-0002-2939-5398 |4 aut | |
| 700 | 1 | |a Copeland, Alex |0 (orcid)0000-0002-3971-5439 |4 aut | |
| 700 | 1 | |a Kyrpides, Nikos C. |0 (orcid)0000-0002-6131-0462 |4 aut | |
| 700 | 1 | |a Jansson, Janet K. |0 (orcid)0000-0002-5487-4315 |4 aut | |
| 700 | 1 | |a McDermott, Jason E. |0 (orcid)0000-0003-2961-2572 |4 aut | |
| 700 | 1 | |a Hofmockel, Kirsten S. |0 (orcid)0000-0003-1586-2167 |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t bioRxiv.org |g (2023) vom: 22. Dez. |
| 773 | 1 | 8 | |g year:2023 |g day:22 |g month:12 |
| 856 | 4 | 0 | |u http://dx.doi.org/10.1101/2023.11.02.565391 |z kostenfrei |3 Volltext |
| 912 | |a GBV_XBI | ||
| 951 | |a AR | ||
| 952 | |j 2023 |b 22 |c 12 | ||