The complete mitochondrial genome of Leucoptera coffeella (Lepidoptera : Lyonetiidae) and phylogenetic relationships within the Yponomeutoidea superfamily
© 2024. The Author(s)..
The coffee leaf miner (Leucoptera coffeella) is one of the major pests of coffee crops in the neotropical regions, and causes major economic losses. Few molecular data are available to identify this pest and advances in the knowledge of the genome of L. coffeella will contribute to improving pest identification and also clarify taxonomy of this microlepidoptera. L. coffeella DNA was extracted and sequenced using PacBio HiFi technology. Here we report the complete L. coffeella circular mitochondrial genome (16,407 bp) assembled using Aladin software. We found a total of 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs) and an A + T rich-region and a D-loop. The L. coffeella mitochondrial gene organization is highly conserved with similarities to lepidopteran mitochondrial gene rearrangements (trnM-trnI-trnQ). We concatenated the 13 PCG to construct a phylogenetic tree and inferred the relationship between L. coffeella and other lepidopteran species. L. coffeella is found in the Lyonetiidae clade together with L. malifoliella and Lyonetia clerkella, both leaf miners. Interestingly, this clade is assigned in the Yponomeutoidea superfamily together with Gracillariidae, and both superfamilies displayed species with leaf-mining feeding habits.
| Medienart: |
E-Artikel |
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| Erscheinungsjahr: |
2024 |
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| Erschienen: |
2024 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:14 |
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| Enthalten in: |
Scientific reports - 14(2024), 1 vom: 26. März, Seite 7119 |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Pereira Dos Santos, Mateus [VerfasserIn] |
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| Anmerkungen: |
Date Completed 28.03.2024 Date Revised 29.03.2024 published: Electronic Citation Status MEDLINE |
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| doi: |
10.1038/s41598-024-57869-3 |
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| Förderinstitution / Projekttitel: |
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NLM370214641 |
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| 245 | 1 | 4 | |a The complete mitochondrial genome of Leucoptera coffeella (Lepidoptera |b Lyonetiidae) and phylogenetic relationships within the Yponomeutoidea superfamily |
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| 520 | |a The coffee leaf miner (Leucoptera coffeella) is one of the major pests of coffee crops in the neotropical regions, and causes major economic losses. Few molecular data are available to identify this pest and advances in the knowledge of the genome of L. coffeella will contribute to improving pest identification and also clarify taxonomy of this microlepidoptera. L. coffeella DNA was extracted and sequenced using PacBio HiFi technology. Here we report the complete L. coffeella circular mitochondrial genome (16,407 bp) assembled using Aladin software. We found a total of 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs) and an A + T rich-region and a D-loop. The L. coffeella mitochondrial gene organization is highly conserved with similarities to lepidopteran mitochondrial gene rearrangements (trnM-trnI-trnQ). We concatenated the 13 PCG to construct a phylogenetic tree and inferred the relationship between L. coffeella and other lepidopteran species. L. coffeella is found in the Lyonetiidae clade together with L. malifoliella and Lyonetia clerkella, both leaf miners. Interestingly, this clade is assigned in the Yponomeutoidea superfamily together with Gracillariidae, and both superfamilies displayed species with leaf-mining feeding habits | ||
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| 700 | 1 | |a Coiti Togawa, Roberto |e verfasserin |4 aut | |
| 700 | 1 | |a Florencio Martins, Natalia |e verfasserin |4 aut | |
| 700 | 1 | |a Fabricio de Melo Bellard do Nascimento, Eliza |e verfasserin |4 aut | |
| 700 | 1 | |a Lucena, Vivian Santos |e verfasserin |4 aut | |
| 700 | 1 | |a Castellani, Maria Aparecida |e verfasserin |4 aut | |
| 700 | 1 | |a Saliba Albuquerque, Erika Valéria |e verfasserin |4 aut | |
| 700 | 1 | |a Hilliou, Frédérique |e verfasserin |4 aut | |
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