Elucidating phylogenetic relationships within the genus Curcuma through the comprehensive analysis of the chloroplast genome of Curcuma viridiflora Roxb. 1810 (Zingiberaceae)
© 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group..
Curcuma viridiflora Roxb., a plant species of significant pharmaceutical interest, has been the subject of limited chloroplast genomic research. In this study, we present the sequencing and assembly of the C. viridiflora chloroplast genome, which is characterized by a circular chromosome spanning 162,212 base pairs and a GC content of 36.20%. The genome encodes 87 protein-coding genes (PCGs), 38 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. A phylogenetic analysis was conducted, incorporating eight related species, and based on the complete chloroplast genome and protein-coding DNA sequences of six related taxa within the genus. Outgroup species Zingiber zerumbet and Zingiber officinale were also included in the analysis. The results indicate a close relationship between C. viridiflora and Curcuma phaeocaulis, Curcuma sichuanensis, and Curcuma yunnanensis. This study provides the first chloroplast genome of C. viridiflora, thereby contributing a valuable genomic resource for future research on medicinal plants within the Curcuma genus.
| Medienart: |
E-Artikel |
|---|
| Erscheinungsjahr: |
2024 |
|---|---|
| Erschienen: |
2024 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:9 |
|---|---|
| Enthalten in: |
Mitochondrial DNA. Part B, Resources - 9(2024), 3 vom: 27., Seite 371-375 |
| Sprache: |
Englisch |
|---|
| Beteiligte Personen: |
Lin, Ling [VerfasserIn] |
|---|
| Links: |
|---|
| Themen: |
Chloroplast genome |
|---|
| Anmerkungen: |
Date Revised 27.03.2024 published: Electronic-eCollection Citation Status PubMed-not-MEDLINE |
|---|
| doi: |
10.1080/23802359.2024.2329674 |
|---|
| funding: |
|
|---|---|
| Förderinstitution / Projekttitel: |
|
| PPN (Katalog-ID): |
NLM370186680 |
|---|
| LEADER | 01000caa a22002652 4500 | ||
|---|---|---|---|
| 001 | NLM370186680 | ||
| 003 | DE-627 | ||
| 005 | 20240328000520.0 | ||
| 007 | cr uuu---uuuuu | ||
| 008 | 240327s2024 xx |||||o 00| ||eng c | ||
| 024 | 7 | |a 10.1080/23802359.2024.2329674 |2 doi | |
| 028 | 5 | 2 | |a pubmed24n1351.xml |
| 035 | |a (DE-627)NLM370186680 | ||
| 035 | |a (NLM)38529111 | ||
| 040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
| 041 | |a eng | ||
| 100 | 1 | |a Lin, Ling |e verfasserin |4 aut | |
| 245 | 1 | 0 | |a Elucidating phylogenetic relationships within the genus Curcuma through the comprehensive analysis of the chloroplast genome of Curcuma viridiflora Roxb. 1810 (Zingiberaceae) |
| 264 | 1 | |c 2024 | |
| 336 | |a Text |b txt |2 rdacontent | ||
| 337 | |a ƒaComputermedien |b c |2 rdamedia | ||
| 338 | |a ƒa Online-Ressource |b cr |2 rdacarrier | ||
| 500 | |a Date Revised 27.03.2024 | ||
| 500 | |a published: Electronic-eCollection | ||
| 500 | |a Citation Status PubMed-not-MEDLINE | ||
| 520 | |a © 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. | ||
| 520 | |a Curcuma viridiflora Roxb., a plant species of significant pharmaceutical interest, has been the subject of limited chloroplast genomic research. In this study, we present the sequencing and assembly of the C. viridiflora chloroplast genome, which is characterized by a circular chromosome spanning 162,212 base pairs and a GC content of 36.20%. The genome encodes 87 protein-coding genes (PCGs), 38 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. A phylogenetic analysis was conducted, incorporating eight related species, and based on the complete chloroplast genome and protein-coding DNA sequences of six related taxa within the genus. Outgroup species Zingiber zerumbet and Zingiber officinale were also included in the analysis. The results indicate a close relationship between C. viridiflora and Curcuma phaeocaulis, Curcuma sichuanensis, and Curcuma yunnanensis. This study provides the first chloroplast genome of C. viridiflora, thereby contributing a valuable genomic resource for future research on medicinal plants within the Curcuma genus | ||
| 650 | 4 | |a Journal Article | |
| 650 | 4 | |a Chloroplast genome | |
| 650 | 4 | |a Curcuma viridiflora | |
| 650 | 4 | |a phylogenetic relationships | |
| 700 | 1 | |a Hao, Zhigang |e verfasserin |4 aut | |
| 700 | 1 | |a Zhou, Liying |e verfasserin |4 aut | |
| 700 | 1 | |a Liu, Wenyi |e verfasserin |4 aut | |
| 700 | 1 | |a Liu, Nian |e verfasserin |4 aut | |
| 700 | 1 | |a Wang, Kebao |e verfasserin |4 aut | |
| 700 | 1 | |a Jia, Ruizong |e verfasserin |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t Mitochondrial DNA. Part B, Resources |d 2016 |g 9(2024), 3 vom: 27., Seite 371-375 |w (DE-627)NLM264242831 |x 2380-2359 |7 nnns |
| 773 | 1 | 8 | |g volume:9 |g year:2024 |g number:3 |g day:27 |g pages:371-375 |
| 856 | 4 | 0 | |u http://dx.doi.org/10.1080/23802359.2024.2329674 |3 Volltext |
| 912 | |a GBV_USEFLAG_A | ||
| 912 | |a GBV_NLM | ||
| 951 | |a AR | ||
| 952 | |d 9 |j 2024 |e 3 |b 27 |h 371-375 | ||