Identifying patterns in amyotrophic lateral sclerosis progression from sparse longitudinal data

© 2022. The Author(s), under exclusive licence to Springer Nature America, Inc..

The clinical presentation of amyotrophic lateral sclerosis (ALS), a fatal neurodegenerative disease, varies widely across patients, making it challenging to determine if potential therapeutics slow progression. We sought to determine whether there were common patterns of disease progression that could aid in the design and analysis of clinical trials. We developed an approach based on a mixture of Gaussian processes to identify clusters of patients sharing similar disease progression patterns, modeling their average trajectories and the variability in each cluster. We show that ALS progression is frequently nonlinear, with periods of stable disease preceded or followed by rapid decline. We also show that our approach can be extended to Alzheimer's and Parkinson's diseases. Our results advance the characterization of disease progression of ALS and provide a flexible modeling approach that can be applied to other progressive diseases.

Medienart:

E-Artikel

Erscheinungsjahr:

2022

Erschienen:

2022

Enthalten in:

Zur Gesamtaufnahme - volume:2

Enthalten in:

Nature computational science - 2(2022), 9 vom: 04. Sept., Seite 605-616

Sprache:

Englisch

Beteiligte Personen:

Ramamoorthy, Divya [VerfasserIn]
Severson, Kristen [VerfasserIn]
Ghosh, Soumya [VerfasserIn]
Sachs, Karen [VerfasserIn]
Answer ALS [VerfasserIn]
Glass, Jonathan D [VerfasserIn]
Fournier, Christina N [VerfasserIn]
Pooled Resource Open-Access ALS Clinical Trials Consortium [VerfasserIn]
ALS/MND Natural History Consortium [VerfasserIn]
Herrington, Todd M [VerfasserIn]
Berry, James D [VerfasserIn]
Ng, Kenney [VerfasserIn]
Fraenkel, Ernest [VerfasserIn]
Baxi, Emily G [Sonstige Person]
Coyne, Alyssa N [Sonstige Person]
Mosmiller, Elizabeth [Sonstige Person]
Hayes, Lindsey [Sonstige Person]
Cerezo, Aianna [Sonstige Person]
Ahmad, Omar [Sonstige Person]
Roy, Promit [Sonstige Person]
Zeiler, Steven [Sonstige Person]
Krakauer, John W [Sonstige Person]
Li, Jonathan [Sonstige Person]
Donde, Aneesh [Sonstige Person]
Huynh, Nhan [Sonstige Person]
Adam, Miriam [Sonstige Person]
Wassie, Brook T [Sonstige Person]
Lenail, Alex [Sonstige Person]
Patel-Murray, Natasha Leanna [Sonstige Person]
Raghav, Yogindra [Sonstige Person]
Sachs, Karen [Sonstige Person]
Kozareva, Velina [Sonstige Person]
Tsitkov, Stanislav [Sonstige Person]
Ehrenberger, Tobias [Sonstige Person]
Kaye, Julia A [Sonstige Person]
Lima, Leandro [Sonstige Person]
Wyman, Stacia [Sonstige Person]
Vertudes, Edward [Sonstige Person]
Amirani, Naufa [Sonstige Person]
Raja, Krishna [Sonstige Person]
Thomas, Reuben [Sonstige Person]
Lim, Ryan G [Sonstige Person]
Miramontes, Ricardo [Sonstige Person]
Wu, Jie [Sonstige Person]
Vaibhav, Vineet [Sonstige Person]
Matlock, Andrea [Sonstige Person]
Venkatraman, Vidya [Sonstige Person]
Holewenski, Ronald [Sonstige Person]
Sundararaman, Niveda [Sonstige Person]
Pandey, Rakhi [Sonstige Person]
Manalo, Danica-Mae [Sonstige Person]
Frank, Aaron [Sonstige Person]
Ornelas, Loren [Sonstige Person]
Panther, Lindsey [Sonstige Person]
Gomez, Emilda [Sonstige Person]
Galvez, Erick [Sonstige Person]
Perez, Daniel [Sonstige Person]
Meepe, Imara [Sonstige Person]
Lei, Susan [Sonstige Person]
Pinedo, Louis [Sonstige Person]
Liu, Chunyan [Sonstige Person]
Moran, Ruby [Sonstige Person]
Sareen, Dhruv [Sonstige Person]
Landin, Barry [Sonstige Person]
Agurto, Carla [Sonstige Person]
Cecchi, Guillermo [Sonstige Person]
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Thrower, Sara [Sonstige Person]
Luppino, Sarah [Sonstige Person]
Farrar, Alanna [Sonstige Person]
Pothier, Lindsay [Sonstige Person]
Yu, Hong [Sonstige Person]
Sinani, Ervin [Sonstige Person]
Vigneswaran, Prasha [Sonstige Person]
Sherman, Alexander V [Sonstige Person]
Farr, S Michelle [Sonstige Person]
Mandefro, Berhan [Sonstige Person]
Trost, Hannah [Sonstige Person]
Banuelos, Maria G [Sonstige Person]
Garcia, Veronica [Sonstige Person]
Workman, Michael [Sonstige Person]
Ho, Richie [Sonstige Person]
Baloh, Robert [Sonstige Person]
Roggenbuck, Jennifer [Sonstige Person]
Harms, Matthew B [Sonstige Person]
Prina, Carolyn [Sonstige Person]
Heintzman, Sarah [Sonstige Person]
Kolb, Stephen [Sonstige Person]
Stocksdale, Jennifer [Sonstige Person]
Wang, Keona [Sonstige Person]
Morgan, Todd [Sonstige Person]
Heitzman, Daragh [Sonstige Person]
Jamil, Arish [Sonstige Person]
Jockel-Balsarotti, Jennifer [Sonstige Person]
Karanja, Elizabeth [Sonstige Person]
Markway, Jesse [Sonstige Person]
McCallum, Molly [Sonstige Person]
Miller, Tim [Sonstige Person]
Joslin, Ben [Sonstige Person]
Alibazoglu, Deniz [Sonstige Person]
Ajroud-Driss, Senda [Sonstige Person]
Beavers, Jay C [Sonstige Person]
Bellard, Mary [Sonstige Person]
Bruce, Elizabeth [Sonstige Person]
Maragakis, Nicholas [Sonstige Person]
Cudkowicz, Merit E [Sonstige Person]
Berry, James [Sonstige Person]
Thompson, Terri [Sonstige Person]
Finkbeiner, Steven [Sonstige Person]
Thompson, Leslie M [Sonstige Person]
Van Eyk, Jennifer E [Sonstige Person]
Svendsen, Clive N [Sonstige Person]
Rothstein, Jeffrey D [Sonstige Person]

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Date Completed 08.01.2024

Date Revised 10.02.2024

published: Print-Electronic

Citation Status MEDLINE

doi:

10.1038/s43588-022-00299-w

funding:

Förderinstitution / Projekttitel:

PPN (Katalog-ID):

NLM366680811