A transcriptomics-based investigation of the mechanism of pulmonary fibrosis induced by nickel oxide nanoparticles
© 2024 Wiley Periodicals LLC..
Nickel oxide nanoparticles (NiONPs) are an emerging nanomaterial, which poses a huge threat to the health of workplace population. Nanoparticles induce pulmonary fibrosis, and its mechanisms are associated with noncoding RNAs (ncRNAs). However, ncRNAs and competing endogenous RNA (ceRNA) networks which involved in NiONP-induced pulmonary fibrosis are still unclear. This study aimed to identify ncRNA-related ceRNA networks and investigate the role of the Wnt/β-catenin pathway in pulmonary fibrosis. Male Wistar rats were intratracheally instilled with 0.015, 0.06, and 0.24 mg/kg NiONPs twice a week for 9 weeks. First, we found there were 93 circularRNAs (circRNAs), 74 microRNAs (miRNAs), 124 long non-coding RNAs (lncRNAs), and 1675 messenger RNAs (mRNAs) differentially expressed through microarray analysis. Second, we constructed ceRNA networks among lncRNAs/circRNAs, miRNAs and mRNAs and identified two ceRNA networks (lncMelttl16/miR-382-5p/Hsd17b7 and circIqch/miR-181d-5p/Stat1) after real time-quantitative polymerase chain reaction (RT-qPCR) validation. Furthermore, based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, ncRNAs were found to be involved in biological processes and signaling pathways related to pulmonary fibrosis. KEGG analysis showed that NiONPs activated the Wnt/β-catenin pathway in rats. In vitro, HFL1 cells were treated with 0, 50, 100, and 200 μg/mL NiONPs for 24 h. We found that NiONPs induced collagen deposition and Wnt/β-catenin pathway activation. Moreover, a blockade of Wnt/β-catenin pathway alleviated NiONP-induced collagen deposition. In conclusion, these observations suggested that ncRNAs were crucial in pulmonary fibrosis development and that the Wnt/β-catenin pathway mediated the deposition of collagen.
Medienart: |
E-Artikel |
---|
Erscheinungsjahr: |
2024 |
---|---|
Erschienen: |
2024 |
Enthalten in: |
Zur Gesamtaufnahme - volume:39 |
---|---|
Enthalten in: |
Environmental toxicology - 39(2024), 4 vom: 30. März, Seite 2374-2389 |
Sprache: |
Englisch |
---|
Beteiligte Personen: |
Liu, Han [VerfasserIn] |
---|
Links: |
---|
Anmerkungen: |
Date Completed 11.03.2024 Date Revised 11.03.2024 published: Print-Electronic Citation Status MEDLINE |
---|
doi: |
10.1002/tox.24088 |
---|
funding: |
|
---|---|
Förderinstitution / Projekttitel: |
|
PPN (Katalog-ID): |
NLM366556533 |
---|
LEADER | 01000caa a22002652 4500 | ||
---|---|---|---|
001 | NLM366556533 | ||
003 | DE-627 | ||
005 | 20240311232051.0 | ||
007 | cr uuu---uuuuu | ||
008 | 240108s2024 xx |||||o 00| ||eng c | ||
024 | 7 | |a 10.1002/tox.24088 |2 doi | |
028 | 5 | 2 | |a pubmed24n1323.xml |
035 | |a (DE-627)NLM366556533 | ||
035 | |a (NLM)38165020 | ||
040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
041 | |a eng | ||
100 | 1 | |a Liu, Han |e verfasserin |4 aut | |
245 | 1 | 2 | |a A transcriptomics-based investigation of the mechanism of pulmonary fibrosis induced by nickel oxide nanoparticles |
264 | 1 | |c 2024 | |
336 | |a Text |b txt |2 rdacontent | ||
337 | |a ƒaComputermedien |b c |2 rdamedia | ||
338 | |a ƒa Online-Ressource |b cr |2 rdacarrier | ||
500 | |a Date Completed 11.03.2024 | ||
500 | |a Date Revised 11.03.2024 | ||
500 | |a published: Print-Electronic | ||
500 | |a Citation Status MEDLINE | ||
520 | |a © 2024 Wiley Periodicals LLC. | ||
520 | |a Nickel oxide nanoparticles (NiONPs) are an emerging nanomaterial, which poses a huge threat to the health of workplace population. Nanoparticles induce pulmonary fibrosis, and its mechanisms are associated with noncoding RNAs (ncRNAs). However, ncRNAs and competing endogenous RNA (ceRNA) networks which involved in NiONP-induced pulmonary fibrosis are still unclear. This study aimed to identify ncRNA-related ceRNA networks and investigate the role of the Wnt/β-catenin pathway in pulmonary fibrosis. Male Wistar rats were intratracheally instilled with 0.015, 0.06, and 0.24 mg/kg NiONPs twice a week for 9 weeks. First, we found there were 93 circularRNAs (circRNAs), 74 microRNAs (miRNAs), 124 long non-coding RNAs (lncRNAs), and 1675 messenger RNAs (mRNAs) differentially expressed through microarray analysis. Second, we constructed ceRNA networks among lncRNAs/circRNAs, miRNAs and mRNAs and identified two ceRNA networks (lncMelttl16/miR-382-5p/Hsd17b7 and circIqch/miR-181d-5p/Stat1) after real time-quantitative polymerase chain reaction (RT-qPCR) validation. Furthermore, based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, ncRNAs were found to be involved in biological processes and signaling pathways related to pulmonary fibrosis. KEGG analysis showed that NiONPs activated the Wnt/β-catenin pathway in rats. In vitro, HFL1 cells were treated with 0, 50, 100, and 200 μg/mL NiONPs for 24 h. We found that NiONPs induced collagen deposition and Wnt/β-catenin pathway activation. Moreover, a blockade of Wnt/β-catenin pathway alleviated NiONP-induced collagen deposition. In conclusion, these observations suggested that ncRNAs were crucial in pulmonary fibrosis development and that the Wnt/β-catenin pathway mediated the deposition of collagen | ||
650 | 4 | |a Journal Article | |
650 | 4 | |a NiONPs | |
650 | 4 | |a Wnt/β-catenin | |
650 | 4 | |a ceRNA network | |
650 | 4 | |a noncoding RNA | |
650 | 4 | |a pulmonary fibrosis | |
650 | 7 | |a beta Catenin |2 NLM | |
650 | 7 | |a nickel monoxide |2 NLM | |
650 | 7 | |a C3574QBZ3Y |2 NLM | |
650 | 7 | |a RNA, Circular |2 NLM | |
650 | 7 | |a RNA, Long Noncoding |2 NLM | |
650 | 7 | |a MicroRNAs |2 NLM | |
650 | 7 | |a RNA, Messenger |2 NLM | |
650 | 7 | |a Collagen |2 NLM | |
650 | 7 | |a 9007-34-5 |2 NLM | |
650 | 7 | |a Nickel |2 NLM | |
650 | 7 | |a 7OV03QG267 |2 NLM | |
700 | 1 | |a Yang, Mengmeng |e verfasserin |4 aut | |
700 | 1 | |a Li, Kun |e verfasserin |4 aut | |
700 | 1 | |a Gao, Qing |e verfasserin |4 aut | |
700 | 1 | |a Zheng, Jinfa |e verfasserin |4 aut | |
700 | 1 | |a Gong, Xuefeng |e verfasserin |4 aut | |
700 | 1 | |a Wang, Hui |e verfasserin |4 aut | |
700 | 1 | |a Sun, Yingbiao |e verfasserin |4 aut | |
700 | 1 | |a Chang, Xuhong |e verfasserin |4 aut | |
773 | 0 | 8 | |i Enthalten in |t Environmental toxicology |d 2001 |g 39(2024), 4 vom: 30. März, Seite 2374-2389 |w (DE-627)NLM112466567 |x 1522-7278 |7 nnns |
773 | 1 | 8 | |g volume:39 |g year:2024 |g number:4 |g day:30 |g month:03 |g pages:2374-2389 |
856 | 4 | 0 | |u http://dx.doi.org/10.1002/tox.24088 |3 Volltext |
912 | |a GBV_USEFLAG_A | ||
912 | |a GBV_NLM | ||
951 | |a AR | ||
952 | |d 39 |j 2024 |e 4 |b 30 |c 03 |h 2374-2389 |