Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases

© 2023. The Author(s)..

Somatic mosaicism is defined as an occurrence of two or more populations of cells having genomic sequences differing at given loci in an individual who is derived from a single zygote. It is a characteristic of multicellular organisms that plays a crucial role in normal development and disease. To study the nature and extent of somatic mosaicism in autism spectrum disorder, bipolar disorder, focal cortical dysplasia, schizophrenia, and Tourette syndrome, a multi-institutional consortium called the Brain Somatic Mosaicism Network (BSMN) was formed through the National Institute of Mental Health (NIMH). In addition to genomic data of affected and neurotypical brains, the BSMN also developed and validated a best practices somatic single nucleotide variant calling workflow through the analysis of reference brain tissue. These resources, which include >400 terabytes of data from 1087 subjects, are now available to the research community via the NIMH Data Archive (NDA) and are described here.

Medienart:

E-Artikel

Erscheinungsjahr:

2023

Erschienen:

2023

Enthalten in:

Zur Gesamtaufnahme - volume:10

Enthalten in:

Scientific data - 10(2023), 1 vom: 20. Nov., Seite 813

Sprache:

Englisch

Beteiligte Personen:

Garrison, McKinzie A [VerfasserIn]
Jang, Yeongjun [VerfasserIn]
Bae, Taejeong [VerfasserIn]
Cherskov, Adriana [VerfasserIn]
Emery, Sarah B [VerfasserIn]
Fasching, Liana [VerfasserIn]
Jones, Attila [VerfasserIn]
Moldovan, John B [VerfasserIn]
Molitor, Cindy [VerfasserIn]
Pochareddy, Sirisha [VerfasserIn]
Peters, Mette A [VerfasserIn]
Shin, Joo Heon [VerfasserIn]
Wang, Yifan [VerfasserIn]
Yang, Xiaoxu [VerfasserIn]
Akbarian, Schahram [VerfasserIn]
Chess, Andrew [VerfasserIn]
Gage, Fred H [VerfasserIn]
Gleeson, Joseph G [VerfasserIn]
Kidd, Jeffrey M [VerfasserIn]
McConnell, Michael [VerfasserIn]
Mills, Ryan E [VerfasserIn]
Moran, John V [VerfasserIn]
Park, Peter J [VerfasserIn]
Sestan, Nenad [VerfasserIn]
Urban, Alexander E [VerfasserIn]
Vaccarino, Flora M [VerfasserIn]
Walsh, Christopher A [VerfasserIn]
Weinberger, Daniel R [VerfasserIn]
Wheelan, Sarah J [VerfasserIn]
Abyzov, Alexej [VerfasserIn]
BSMN Consortium [VerfasserIn]
Amero, Aitor Serres [Sonstige Person]
Antaki, Danny [Sonstige Person]
Averbuj, Dan [Sonstige Person]
Ball, Laurel [Sonstige Person]
Bizzotto, Sara [Sonstige Person]
Bohrson, Craig [Sonstige Person]
Borges-Monroy, Rebeca [Sonstige Person]
Breuss, Martin [Sonstige Person]
Cho, Sean [Sonstige Person]
Chu, Chong [Sonstige Person]
Chung, Changuk [Sonstige Person]
Cortes-Ciriano, Isidro [Sonstige Person]
Coulter, Michael [Sonstige Person]
Daily, Kenneth [Sonstige Person]
Dias, Caroline [Sonstige Person]
D'Gama, Alissa [Sonstige Person]
Dou, Yanmei [Sonstige Person]
Erwin, Jennifer [Sonstige Person]
Flasch, Diane A [Sonstige Person]
Frisbie, Trenton J [Sonstige Person]
Galor, Alon [Sonstige Person]
Ganz, Javier [Sonstige Person]
Gulhan, Doga [Sonstige Person]
Hill, Robert [Sonstige Person]
Huang, August Yue [Sonstige Person]
Jaffe, Andrew [Sonstige Person]
Jourdon, Alexandre [Sonstige Person]
Juan, David [Sonstige Person]
Khoshkhoo, Sattar [Sonstige Person]
Kim, Sonia [Sonstige Person]
Kopera, Huira C [Sonstige Person]
Kwan, Kenneth Y [Sonstige Person]
Kwon, Minseok [Sonstige Person]
Langmead, Ben [Sonstige Person]
Lee, Eunjung Alice [Sonstige Person]
Linker, Sara [Sonstige Person]
Lobon, Irene [Sonstige Person]
Lodato, Michael A [Sonstige Person]
Luquette, Lovelace J [Sonstige Person]
Mathern, Gary [Sonstige Person]
Marques-Bonet, Tomas [Sonstige Person]
Maury, Eduardo A [Sonstige Person]
Miller, Michael [Sonstige Person]
Moruno, Manuel Solis [Sonstige Person]
Narurkar, Rujuta [Sonstige Person]
Paquola, Apua [Sonstige Person]
Pattni, Reenal [Sonstige Person]
Perez, Raquel Garcia [Sonstige Person]
Povolotskaya, Inna [Sonstige Person]
Reed, Patrick [Sonstige Person]
Rodin, Rachel [Sonstige Person]
Rosenbluh, Chaggai [Sonstige Person]
Scuderi, Soraya [Sonstige Person]
Sherman, Maxwell [Sonstige Person]
Straub, Richard [Sonstige Person]
Soriano, Eduardo [Sonstige Person]
Sun, Chen [Sonstige Person]
Thorpe, Jeremy [Sonstige Person]
Viswanadham, Vinay [Sonstige Person]
Wang, Meiyan [Sonstige Person]
Zhao, Xuefang [Sonstige Person]
Zhou, Bo [Sonstige Person]
Zhou, Weichen [Sonstige Person]
Zhou, Zinan [Sonstige Person]
Zhu, Xiaowei [Sonstige Person]

Links:

Volltext

Themen:

Dataset
Journal Article

Anmerkungen:

Date Completed 28.11.2023

Date Revised 12.03.2024

published: Electronic

Citation Status MEDLINE

doi:

10.1038/s41597-023-02645-7

funding:

Förderinstitution / Projekttitel:

PPN (Katalog-ID):

NLM364770619