Genome-Wide Identification of NAC Gene Family and Expression Analysis under Abiotic Stresses in Avena sativa
In this study, a total of 177 NAC members were identified in Avena sativa, located on 21 chromosomes. Phylogenetic analysis showed that AsNAC proteins could be divided into seven subfamilies (I-VII), and that proteins in the same subfamily have similar protein motifs. Gene structure analysis found that NAC introns ranged from 1 to 17. Cis-element analysis of the promoter indicated that the gene family may have stress-related elements and growth regulation elements. Through qRT-PCR experiments, we speculated that AsNACs genes can respond to abiotic stresses such as cold, freezing, salt, and saline alkali. This study provides a theoretical basis for further exploring the function of the NAC gene family in A. sativa.
| Medienart: |
E-Artikel |
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| Erscheinungsjahr: |
2023 |
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| Erschienen: |
2023 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:14 |
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| Enthalten in: |
Genes - 14(2023), 6 vom: 29. Mai |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Ling, Lei [VerfasserIn] |
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| Links: |
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| Themen: |
Avena sativa |
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| Anmerkungen: |
Date Completed 29.06.2023 Date Revised 01.07.2023 published: Electronic Citation Status MEDLINE |
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| doi: |
10.3390/genes14061186 |
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| funding: |
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| Förderinstitution / Projekttitel: |
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| PPN (Katalog-ID): |
NLM358736781 |
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| 520 | |a In this study, a total of 177 NAC members were identified in Avena sativa, located on 21 chromosomes. Phylogenetic analysis showed that AsNAC proteins could be divided into seven subfamilies (I-VII), and that proteins in the same subfamily have similar protein motifs. Gene structure analysis found that NAC introns ranged from 1 to 17. Cis-element analysis of the promoter indicated that the gene family may have stress-related elements and growth regulation elements. Through qRT-PCR experiments, we speculated that AsNACs genes can respond to abiotic stresses such as cold, freezing, salt, and saline alkali. This study provides a theoretical basis for further exploring the function of the NAC gene family in A. sativa | ||
| 650 | 4 | |a Journal Article | |
| 650 | 4 | |a Research Support, Non-U.S. Gov't | |
| 650 | 4 | |a Avena sativa | |
| 650 | 4 | |a NAC transcription factor | |
| 650 | 4 | |a evolutionary analysis: gene expression | |
| 700 | 1 | |a Li, Mingjing |e verfasserin |4 aut | |
| 700 | 1 | |a Chen, Naiyu |e verfasserin |4 aut | |
| 700 | 1 | |a Xie, Xinying |e verfasserin |4 aut | |
| 700 | 1 | |a Han, Zihui |e verfasserin |4 aut | |
| 700 | 1 | |a Ren, Guoling |e verfasserin |4 aut | |
| 700 | 1 | |a Yin, Yajie |e verfasserin |4 aut | |
| 700 | 1 | |a Jiang, Huixin |e verfasserin |4 aut | |
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