Teaching Python programming for bioinformatics with Jupyter notebook in the Post-COVID-19 era
© 2023 International Union of Biochemistry and Molecular Biology..
The COVID-19 pandemic has forced the Bioinformatics course to switch from on-site teaching to remote learning. This shift has prompted a change in teaching methods and laboratory activities. Students need to have a basic understanding of DNA sequences and how to analyze them using custom scripts. To facilitate learning, we have modified the course to use Jupyter Notebook, which offers an alternative approach to writing custom scripts for basic DNA sequence analysis. This approach allows students to acquire the necessary skills while working remotely. It is a versatile and user-friendly platform that can be used to combine explanations, code, and results in a single document. This feature enables students to interact with the code and results, making the learning process more engaging and effective. Jupyter Notebook provides a hybrid approach to learning basic Python scripting and genomics that is effective for remote teaching and learning during the COVID-19 pandemic.
| Medienart: |
E-Artikel |
|---|
| Erscheinungsjahr: |
2023 |
|---|---|
| Erschienen: |
2023 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:51 |
|---|---|
| Enthalten in: |
Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology - 51(2023), 5 vom: 18. Sept., Seite 537-539 |
| Sprache: |
Englisch |
|---|
| Beteiligte Personen: |
Gupta, Yash Munnalal [VerfasserIn] |
|---|
| Links: |
|---|
| Themen: |
Bioinformatics |
|---|
| Anmerkungen: |
Date Revised 06.10.2023 published: Print-Electronic Citation Status Publisher |
|---|
| doi: |
10.1002/bmb.21746 |
|---|
| funding: |
|
|---|---|
| Förderinstitution / Projekttitel: |
|
| PPN (Katalog-ID): |
NLM35701815X |
|---|
| LEADER | 01000naa a22002652 4500 | ||
|---|---|---|---|
| 001 | NLM35701815X | ||
| 003 | DE-627 | ||
| 005 | 20231226071704.0 | ||
| 007 | cr uuu---uuuuu | ||
| 008 | 231226s2023 xx |||||o 00| ||eng c | ||
| 024 | 7 | |a 10.1002/bmb.21746 |2 doi | |
| 028 | 5 | 2 | |a pubmed24n1190.xml |
| 035 | |a (DE-627)NLM35701815X | ||
| 035 | |a (NLM)37199252 | ||
| 040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
| 041 | |a eng | ||
| 100 | 1 | |a Gupta, Yash Munnalal |e verfasserin |4 aut | |
| 245 | 1 | 0 | |a Teaching Python programming for bioinformatics with Jupyter notebook in the Post-COVID-19 era |
| 264 | 1 | |c 2023 | |
| 336 | |a Text |b txt |2 rdacontent | ||
| 337 | |a ƒaComputermedien |b c |2 rdamedia | ||
| 338 | |a ƒa Online-Ressource |b cr |2 rdacarrier | ||
| 500 | |a Date Revised 06.10.2023 | ||
| 500 | |a published: Print-Electronic | ||
| 500 | |a Citation Status Publisher | ||
| 520 | |a © 2023 International Union of Biochemistry and Molecular Biology. | ||
| 520 | |a The COVID-19 pandemic has forced the Bioinformatics course to switch from on-site teaching to remote learning. This shift has prompted a change in teaching methods and laboratory activities. Students need to have a basic understanding of DNA sequences and how to analyze them using custom scripts. To facilitate learning, we have modified the course to use Jupyter Notebook, which offers an alternative approach to writing custom scripts for basic DNA sequence analysis. This approach allows students to acquire the necessary skills while working remotely. It is a versatile and user-friendly platform that can be used to combine explanations, code, and results in a single document. This feature enables students to interact with the code and results, making the learning process more engaging and effective. Jupyter Notebook provides a hybrid approach to learning basic Python scripting and genomics that is effective for remote teaching and learning during the COVID-19 pandemic | ||
| 650 | 4 | |a Journal Article | |
| 650 | 4 | |a COVID-19 | |
| 650 | 4 | |a Jupyter notebook | |
| 650 | 4 | |a Python | |
| 650 | 4 | |a bioinformatics | |
| 650 | 4 | |a teaching material | |
| 700 | 1 | |a Kirana, Satwika Nindya |e verfasserin |4 aut | |
| 700 | 1 | |a Homchan, Somjit |e verfasserin |4 aut | |
| 700 | 1 | |a Tanasarnpaiboon, Supatcharee |e verfasserin |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology |d 2004 |g 51(2023), 5 vom: 18. Sept., Seite 537-539 |w (DE-627)NLM186511779 |x 1539-3429 |7 nnns |
| 773 | 1 | 8 | |g volume:51 |g year:2023 |g number:5 |g day:18 |g month:09 |g pages:537-539 |
| 856 | 4 | 0 | |u http://dx.doi.org/10.1002/bmb.21746 |3 Volltext |
| 912 | |a GBV_USEFLAG_A | ||
| 912 | |a GBV_NLM | ||
| 951 | |a AR | ||
| 952 | |d 51 |j 2023 |e 5 |b 18 |c 09 |h 537-539 | ||