Proteomic analysis identifies the RNA helicase DDX3X as a host target against SARS-CoV-2 infection

Copyright © 2021 The Author(s). Published by Elsevier B.V. All rights reserved..

COVID-19 is currently a highly pressing health threat and therapeutic strategies to mitigate the infection impact are urgently needed. Characterization of the SARS-CoV-2 interactome in infected cells may represent a powerful tool to identify cellular proteins hijacked by viruses for their life cycle and develop host-oriented antiviral therapeutics. Here we report the proteomic characterization of host proteins interacting with SARS-CoV-2 Nucleoprotein in infected Vero E6 cells. We identified 24 high-confidence proteins mainly playing a role in RNA metabolism and translation, including RNA helicases and scaffold proteins involved in the formation of stress granules, cytoplasmic aggregates of messenger ribonucleoproteins that accumulate as a result of stress-induced translation arrest. Analysis of stress granules upon SARS-CoV-2 infection showed that these structures are not induced in infected cells, neither eIF2α phosphorylation, an upstream event leading to stress-induced translation inhibition. Notably, we found that G3BP1, a stress granule component that associates with the Nucleoprotein, is required for efficient SARS-CoV-2 replication. Moreover, we showed that the Nucleoprotein-interacting RNA helicase DDX3X colocalizes with viral RNA foci and its inhibition by small molecules or small interfering RNAs significantly reduces viral replication. Altogether, these results indicate that SARS-CoV-2 subverts the stress granule machinery and exploits G3BP1 and DDX3X for its replication cycle, offering groundwork for future development of host-directed therapies.

Medienart:

E-Artikel

Erscheinungsjahr:

2021

Erschienen:

2021

Enthalten in:

Zur Gesamtaufnahme - volume:190

Enthalten in:

Antiviral research - 190(2021) vom: 30. Juni, Seite 105064

Sprache:

Englisch

Beteiligte Personen:

Ciccosanti, Fabiola [VerfasserIn]
Di Rienzo, Martina [VerfasserIn]
Romagnoli, Alessandra [VerfasserIn]
Colavita, Francesca [VerfasserIn]
Refolo, Giulia [VerfasserIn]
Castilletti, Concetta [VerfasserIn]
Agrati, Chiara [VerfasserIn]
Brai, Annalaura [VerfasserIn]
Manetti, Fabrizio [VerfasserIn]
Botta, Lorenzo [VerfasserIn]
Capobianchi, Maria Rosaria [VerfasserIn]
Ippolito, Giuseppe [VerfasserIn]
Piacentini, Mauro [VerfasserIn]
Fimia, Gian Maria [VerfasserIn]

Links:

Volltext

Themen:

Antiviral Agents
Antiviral drugs
COVID-19
DDX3X protein, human
DEAD RNA helicase
DEAD-box RNA Helicases
DNA Helicases
EC 3.6.1.-
EC 3.6.4.-
EC 3.6.4.12
EC 3.6.4.13
Eukaryotic Initiation Factor-2
G3BP1
G3BP1 protein, human
Journal Article
Poly-ADP-Ribose Binding Proteins
Proteomics
RNA, Small Interfering
RNA, Viral
RNA Helicases
RNA Recognition Motif Proteins
Research Support, Non-U.S. Gov't
Stress granules

Anmerkungen:

Date Completed 01.07.2021

Date Revised 17.12.2022

published: Print-Electronic

Citation Status MEDLINE

doi:

10.1016/j.antiviral.2021.105064

funding:

Förderinstitution / Projekttitel:

PPN (Katalog-ID):

NLM323376134