Integrative functional genomic analysis of human brain development and neuropsychiatric risks

Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works..

To broaden our understanding of human neurodevelopment, we profiled transcriptomic and epigenomic landscapes across brain regions and/or cell types for the entire span of prenatal and postnatal development. Integrative analysis revealed temporal, regional, sex, and cell type-specific dynamics. We observed a global transcriptomic cup-shaped pattern, characterized by a late fetal transition associated with sharply decreased regional differences and changes in cellular composition and maturation, followed by a reversal in childhood-adolescence, and accompanied by epigenomic reorganizations. Analysis of gene coexpression modules revealed relationships with epigenomic regulation and neurodevelopmental processes. Genes with genetic associations to brain-based traits and neuropsychiatric disorders (including MEF2C, SATB2, SOX5, TCF4, and TSHZ3) converged in a small number of modules and distinct cell types, revealing insights into neurodevelopment and the genomic basis of neuropsychiatric risks.

Medienart:

E-Artikel

Erscheinungsjahr:

2018

Erschienen:

2018

Enthalten in:

Zur Gesamtaufnahme - volume:362

Enthalten in:

Science (New York, N.Y.) - 362(2018), 6420 vom: 14. Dez.

Sprache:

Englisch

Beteiligte Personen:

Li, Mingfeng [VerfasserIn]
Santpere, Gabriel [VerfasserIn]
Imamura Kawasawa, Yuka [VerfasserIn]
Evgrafov, Oleg V [VerfasserIn]
Gulden, Forrest O [VerfasserIn]
Pochareddy, Sirisha [VerfasserIn]
Sunkin, Susan M [VerfasserIn]
Li, Zhen [VerfasserIn]
Shin, Yurae [VerfasserIn]
Zhu, Ying [VerfasserIn]
Sousa, André M M [VerfasserIn]
Werling, Donna M [VerfasserIn]
Kitchen, Robert R [VerfasserIn]
Kang, Hyo Jung [VerfasserIn]
Pletikos, Mihovil [VerfasserIn]
Choi, Jinmyung [VerfasserIn]
Muchnik, Sydney [VerfasserIn]
Xu, Xuming [VerfasserIn]
Wang, Daifeng [VerfasserIn]
Lorente-Galdos, Belen [VerfasserIn]
Liu, Shuang [VerfasserIn]
Giusti-Rodríguez, Paola [VerfasserIn]
Won, Hyejung [VerfasserIn]
de Leeuw, Christiaan A [VerfasserIn]
Pardiñas, Antonio F [VerfasserIn]
BrainSpan Consortium [VerfasserIn]
PsychENCODE Consortium [VerfasserIn]
PsychENCODE Developmental Subgroup [VerfasserIn]
Hu, Ming [VerfasserIn]
Jin, Fulai [VerfasserIn]
Li, Yun [VerfasserIn]
Owen, Michael J [VerfasserIn]
O'Donovan, Michael C [VerfasserIn]
Walters, James T R [VerfasserIn]
Posthuma, Danielle [VerfasserIn]
Reimers, Mark A [VerfasserIn]
Levitt, Pat [VerfasserIn]
Weinberger, Daniel R [VerfasserIn]
Hyde, Thomas M [VerfasserIn]
Kleinman, Joel E [VerfasserIn]
Geschwind, Daniel H [VerfasserIn]
Hawrylycz, Michael J [VerfasserIn]
State, Matthew W [VerfasserIn]
Sanders, Stephan J [VerfasserIn]
Sullivan, Patrick F [VerfasserIn]
Gerstein, Mark B [VerfasserIn]
Lein, Ed S [VerfasserIn]
Knowles, James A [VerfasserIn]
Sestan, Nenad [VerfasserIn]
Willsey, A Jeremy [Sonstige Person]
Oldre, Aaron [Sonstige Person]
Szafer, Aaron [Sonstige Person]
Camarena, Adrian [Sonstige Person]
Cherskov, Adriana [Sonstige Person]
Charney, Alexander W [Sonstige Person]
Abyzov, Alexej [Sonstige Person]
Kozlenkov, Alexey [Sonstige Person]
Safi, Alexias [Sonstige Person]
Jones, Allan R [Sonstige Person]
Ashley-Koch, Allison E [Sonstige Person]
Ebbert, Amanda [Sonstige Person]
Price, Amanda J [Sonstige Person]
Sekijima, Amanda [Sonstige Person]
Kefi, Amira [Sonstige Person]
Bernard, Amy [Sonstige Person]
Amiri, Anahita [Sonstige Person]
Sboner, Andrea [Sonstige Person]
Clark, Andrew [Sonstige Person]
Jaffe, Andrew E [Sonstige Person]
Tebbenkamp, Andrew T N [Sonstige Person]
Sodt, Andy J [Sonstige Person]
Guillozet-Bongaarts, Angie L [Sonstige Person]
Nairn, Angus C [Sonstige Person]
Carey, Anita [Sonstige Person]
Huttner, Anita [Sonstige Person]
Chervenak, Ann [Sonstige Person]
Szekely, Anna [Sonstige Person]
Shieh, Annie W [Sonstige Person]
Harmanci, Arif [Sonstige Person]
Lipska, Barbara K [Sonstige Person]
Carlyle, Becky C [Sonstige Person]
Gregor, Ben W [Sonstige Person]
Kassim, Bibi S [Sonstige Person]
Sheppard, Brooke [Sonstige Person]
Bichsel, Candace [Sonstige Person]
Hahn, Chang-Gyu [Sonstige Person]
Lee, Chang-Kyu [Sonstige Person]
Chen, Chao [Sonstige Person]
Kuan, Chihchau L [Sonstige Person]
Dang, Chinh [Sonstige Person]
Lau, Chris [Sonstige Person]
Cuhaciyan, Christine [Sonstige Person]
Armoskus, Christoper [Sonstige Person]
Mason, Christopher E [Sonstige Person]
Liu, Chunyu [Sonstige Person]
Slaughterbeck, Cliff R [Sonstige Person]
Bennet, Crissa [Sonstige Person]
Pinto, Dalila [Sonstige Person]
Polioudakis, Damon [Sonstige Person]
Franjic, Daniel [Sonstige Person]
Miller, Daniel J [Sonstige Person]
Bertagnolli, Darren [Sonstige Person]
Lewis, David A [Sonstige Person]
Feng, David [Sonstige Person]
Sandman, David [Sonstige Person]
Clarke, Declan [Sonstige Person]
Williams, Derric [Sonstige Person]
DelValle, Diane [Sonstige Person]
Fitzgerald, Dominic [Sonstige Person]
Shen, Elaine H [Sonstige Person]
Flatow, Elie [Sonstige Person]
Zharovsky, Elizabeth [Sonstige Person]
Burke, Emily E [Sonstige Person]
Olson, Eric [Sonstige Person]
Fulfs, Erich [Sonstige Person]
Mattei, Eugenio [Sonstige Person]
Hadjimichael, Evi [Sonstige Person]
Deelman, Ewa [Sonstige Person]
Navarro, Fabio C P [Sonstige Person]
Wu, Feinan [Sonstige Person]
Lee, Felix [Sonstige Person]
Cheng, Feng [Sonstige Person]
Goes, Fernando S [Sonstige Person]
Vaccarino, Flora M [Sonstige Person]
Liu, Fuchen [Sonstige Person]
Hoffman, Gabriel E [Sonstige Person]
Gürsoy, Gamze [Sonstige Person]
Gee, Garrett [Sonstige Person]
Mehta, Gaurang [Sonstige Person]
Coppola, Gianfilippo [Sonstige Person]
Giase, Gina [Sonstige Person]
Sedmak, Goran [Sonstige Person]
Johnson, Graham D [Sonstige Person]
Wray, Gregory A [Sonstige Person]
Crawford, Gregory E [Sonstige Person]
Gu, Guangyu [Sonstige Person]
van Bakel, Harm [Sonstige Person]
Witt, Heather [Sonstige Person]
Yoon, Hee Jae [Sonstige Person]
Pratt, Henry [Sonstige Person]
Zhao, Hongyu [Sonstige Person]
Glass, Ian A [Sonstige Person]
Huey, Jack [Sonstige Person]
Arnold, James [Sonstige Person]
Noonan, James P [Sonstige Person]
Bendl, Jaroslav [Sonstige Person]
Jochim, Jayson M [Sonstige Person]
Goldy, Jeff [Sonstige Person]
Herstein, Jennifer [Sonstige Person]

Links:

Volltext

Themen:

Dataset
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't

Anmerkungen:

Date Completed 14.01.2019

Date Revised 14.02.2024

published: Print

Citation Status MEDLINE

doi:

10.1126/science.aat7615

funding:

Förderinstitution / Projekttitel:

PPN (Katalog-ID):

NLM291758177