Identification of further diversity among posaviruses
Recently, there have been reports of new members of posavirus-like viruses in the order Picornavirales. In this study, using a metagenomics approach, 11 posavirus-like sequences (>7,000 nucleotides) were detected in 155 porcine fecal samples. Phylogenetic analysis revealed that the newly identified virus sequences, together with other posavirus-like viruses, form distinct clusters within the order Picornavirales, composed of eight genogroups and unassigned sequences based on amino acid sequences of the helicase and RNA-dependent RNA polymerase regions, with <40 % and <50 % sequence identity, respectively. We propose further classifications of highly diverse posavirus populations based on newly identified sequences from Japanese pig feces.
| Medienart: |
E-Artikel |
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| Erscheinungsjahr: |
2016 |
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| Erschienen: |
2016 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:161 |
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| Enthalten in: |
Archives of virology - 161(2016), 12 vom: 16. Dez., Seite 3541-3548 |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Sano, Kaori [VerfasserIn] |
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| Themen: |
EC 2.7.7.48 |
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| Anmerkungen: |
Date Completed 26.01.2017 Date Revised 09.12.2020 published: Print-Electronic Citation Status MEDLINE |
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| Förderinstitution / Projekttitel: |
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| 245 | 1 | 0 | |a Identification of further diversity among posaviruses |
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| 520 | |a Recently, there have been reports of new members of posavirus-like viruses in the order Picornavirales. In this study, using a metagenomics approach, 11 posavirus-like sequences (>7,000 nucleotides) were detected in 155 porcine fecal samples. Phylogenetic analysis revealed that the newly identified virus sequences, together with other posavirus-like viruses, form distinct clusters within the order Picornavirales, composed of eight genogroups and unassigned sequences based on amino acid sequences of the helicase and RNA-dependent RNA polymerase regions, with <40 % and <50 % sequence identity, respectively. We propose further classifications of highly diverse posavirus populations based on newly identified sequences from Japanese pig feces | ||
| 650 | 4 | |a Journal Article | |
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| 700 | 1 | |a Naoi, Yuki |e verfasserin |4 aut | |
| 700 | 1 | |a Kishimoto, Mai |e verfasserin |4 aut | |
| 700 | 1 | |a Masuda, Tsuneyuki |e verfasserin |4 aut | |
| 700 | 1 | |a Tanabe, Hitomi |e verfasserin |4 aut | |
| 700 | 1 | |a Ito, Mika |e verfasserin |4 aut | |
| 700 | 1 | |a Niira, Kazutaka |e verfasserin |4 aut | |
| 700 | 1 | |a Haga, Kei |e verfasserin |4 aut | |
| 700 | 1 | |a Asano, Keigo |e verfasserin |4 aut | |
| 700 | 1 | |a Tsuchiaka, Shinobu |e verfasserin |4 aut | |
| 700 | 1 | |a Omatsu, Tsutomu |e verfasserin |4 aut | |
| 700 | 1 | |a Furuya, Tetsuya |e verfasserin |4 aut | |
| 700 | 1 | |a Katayama, Yukie |e verfasserin |4 aut | |
| 700 | 1 | |a Oba, Mami |e verfasserin |4 aut | |
| 700 | 1 | |a Ouchi, Yoshinao |e verfasserin |4 aut | |
| 700 | 1 | |a Yamasato, Hiroshi |e verfasserin |4 aut | |
| 700 | 1 | |a Ishida, Motohiko |e verfasserin |4 aut | |
| 700 | 1 | |a Shirai, Junsuke |e verfasserin |4 aut | |
| 700 | 1 | |a Katayama, Kazuhiko |e verfasserin |4 aut | |
| 700 | 1 | |a Mizutani, Tetsuya |e verfasserin |4 aut | |
| 700 | 1 | |a Nagai, Makoto |e verfasserin |4 aut | |
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