Phylogeny of finescale shiners of the genus Lythrurus (Cypriniformes : Cyprinidae) inferred from four mitochondrial genes
We infer the phylogenetic relationships of finescale shiners of the genus Lythrurus, a group of 11 species of freshwater minnows widely distributed in eastern North America, using DNA sequences from the ND2 (1047 bp), ATPase8 and 6 (823 bp), and ND3 (421 bp) mitochondrial protein-coding genes. The topologies resulting from maximum parsimony, Bayesian, and maximum likelihood tree building methods are broadly congruent, with two distinct clades within the genus: the L. umbratilis clade (L. umbratilis + L. lirus + (L. fasciolaris + (L. ardens, L. matutinus))) and the L. bellus clade (L. fumeus + L. snelsoni + (L. roseipinnis + (L. atrapiculus + (L. bellus, L. algenotus)))). Support is weak at the base of several clades, but strongly supported nodes differ significantly from prior investigations. In particular, our results confirm and extend earlier studies recovering two clades within Lythrurus corresponding to groups with largely "northern" and "southern" geographic distributions. Several species in this genus are listed in the United States as threatened or of special concern due to habitat degradation or limited geographic ranges. In this study, populations assigned to L. roseipinnis show significant genetic divergence suggesting that there is greater genetic diversity within this species than its current taxonomy reflects. A full accounting of the biodiversity of the genus awaits further study.
| Medienart: |
Artikel |
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| Erscheinungsjahr: |
2007 |
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| Erschienen: |
2007 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:42 |
|---|---|
| Enthalten in: |
Molecular phylogenetics and evolution - 42(2007), 2 vom: 15. Feb., Seite 287-97 |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Pramuk, Jennifer B [VerfasserIn] |
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| Themen: |
DNA, Mitochondrial |
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| Anmerkungen: |
Date Completed 26.06.2007 Date Revised 21.11.2008 published: Print-Electronic GENBANK: DQ306567, DQ306568, DQ306569, DQ306570, DQ306571, DQ306572, DQ306573, DQ306574, DQ306575, DQ306576, DQ306577, DQ306578, DQ306579, DQ306580, DQ306581, DQ306582, DQ306583, DQ306584, DQ306585, DQ306586, DQ306587, DQ306588, DQ306589, DQ306590, DQ306591, DQ306592, DQ306593, DQ306594, DQ306595, DQ306596, DQ306597, DQ306598, DQ306599, DQ306600, DQ306601, DQ306602, DQ306603, DQ306604, DQ306605, DQ306606, DQ306607, DQ306608, DQ306609, DQ306610, DQ306611, DQ306612, DQ306613, DQ306614, DQ306615, DQ306616, DQ306617, DQ306618, DQ306619, DQ306620, DQ306621, DQ306622, DQ306623, DQ306624, DQ306625, DQ306626, DQ306627, DQ306628, DQ306629, DQ306630, DQ306631, DQ306632, DQ306633, DQ306634, DQ306635, DQ306636, DQ306637, DQ306638, DQ306639, DQ306640, DQ306641, DQ306642, DQ306643, DQ306644, DQ306645, DQ306646, DQ306647, DQ306648, DQ306649, DQ306650, DQ306651, DQ306652, DQ306653, DQ306654, DQ306655, DQ306656, DQ306657, DQ306658, DQ306659, DQ306660, DQ306661, DQ306662, DQ306663, DQ306664, DQ306665, DQ306666, DQ306667, DQ306668, DQ306669, DQ306670, DQ306671, DQ306672, DQ306673, DQ306674, DQ306675, DQ306676, DQ306677, DQ306678, DQ306679, DQ306680, DQ306681, DQ306682, DQ306683, DQ306684, DQ306685, DQ306686, DQ306687, DQ306688, DQ306689, DQ306690, DQ306691, DQ306692, DQ306693, DQ306694, DQ306695 Citation Status MEDLINE |
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| Förderinstitution / Projekttitel: |
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| PPN (Katalog-ID): |
NLM164468919 |
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| LEADER | 01000naa a22002652 4500 | ||
|---|---|---|---|
| 001 | NLM164468919 | ||
| 003 | DE-627 | ||
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| 007 | tu | ||
| 008 | 231223s2007 xx ||||| 00| ||eng c | ||
| 028 | 5 | 2 | |a pubmed24n0548.xml |
| 035 | |a (DE-627)NLM164468919 | ||
| 035 | |a (NLM)16876442 | ||
| 040 | |a DE-627 |b ger |c DE-627 |e rakwb | ||
| 041 | |a eng | ||
| 100 | 1 | |a Pramuk, Jennifer B |e verfasserin |4 aut | |
| 245 | 1 | 0 | |a Phylogeny of finescale shiners of the genus Lythrurus (Cypriniformes |b Cyprinidae) inferred from four mitochondrial genes |
| 264 | 1 | |c 2007 | |
| 336 | |a Text |b txt |2 rdacontent | ||
| 337 | |a ohne Hilfsmittel zu benutzen |b n |2 rdamedia | ||
| 338 | |a Band |b nc |2 rdacarrier | ||
| 500 | |a Date Completed 26.06.2007 | ||
| 500 | |a Date Revised 21.11.2008 | ||
| 500 | |a published: Print-Electronic | ||
| 500 | |a GENBANK: DQ306567, DQ306568, DQ306569, DQ306570, DQ306571, DQ306572, DQ306573, DQ306574, DQ306575, DQ306576, DQ306577, DQ306578, DQ306579, DQ306580, DQ306581, DQ306582, DQ306583, DQ306584, DQ306585, DQ306586, DQ306587, DQ306588, DQ306589, DQ306590, DQ306591, DQ306592, DQ306593, DQ306594, DQ306595, DQ306596, DQ306597, DQ306598, DQ306599, DQ306600, DQ306601, DQ306602, DQ306603, DQ306604, DQ306605, DQ306606, DQ306607, DQ306608, DQ306609, DQ306610, DQ306611, DQ306612, DQ306613, DQ306614, DQ306615, DQ306616, DQ306617, DQ306618, DQ306619, DQ306620, DQ306621, DQ306622, DQ306623, DQ306624, DQ306625, DQ306626, DQ306627, DQ306628, DQ306629, DQ306630, DQ306631, DQ306632, DQ306633, DQ306634, DQ306635, DQ306636, DQ306637, DQ306638, DQ306639, DQ306640, DQ306641, DQ306642, DQ306643, DQ306644, DQ306645, DQ306646, DQ306647, DQ306648, DQ306649, DQ306650, DQ306651, DQ306652, DQ306653, DQ306654, DQ306655, DQ306656, DQ306657, DQ306658, DQ306659, DQ306660, DQ306661, DQ306662, DQ306663, DQ306664, DQ306665, DQ306666, DQ306667, DQ306668, DQ306669, DQ306670, DQ306671, DQ306672, DQ306673, DQ306674, DQ306675, DQ306676, DQ306677, DQ306678, DQ306679, DQ306680, DQ306681, DQ306682, DQ306683, DQ306684, DQ306685, DQ306686, DQ306687, DQ306688, DQ306689, DQ306690, DQ306691, DQ306692, DQ306693, DQ306694, DQ306695 | ||
| 500 | |a Citation Status MEDLINE | ||
| 520 | |a We infer the phylogenetic relationships of finescale shiners of the genus Lythrurus, a group of 11 species of freshwater minnows widely distributed in eastern North America, using DNA sequences from the ND2 (1047 bp), ATPase8 and 6 (823 bp), and ND3 (421 bp) mitochondrial protein-coding genes. The topologies resulting from maximum parsimony, Bayesian, and maximum likelihood tree building methods are broadly congruent, with two distinct clades within the genus: the L. umbratilis clade (L. umbratilis + L. lirus + (L. fasciolaris + (L. ardens, L. matutinus))) and the L. bellus clade (L. fumeus + L. snelsoni + (L. roseipinnis + (L. atrapiculus + (L. bellus, L. algenotus)))). Support is weak at the base of several clades, but strongly supported nodes differ significantly from prior investigations. In particular, our results confirm and extend earlier studies recovering two clades within Lythrurus corresponding to groups with largely "northern" and "southern" geographic distributions. Several species in this genus are listed in the United States as threatened or of special concern due to habitat degradation or limited geographic ranges. In this study, populations assigned to L. roseipinnis show significant genetic divergence suggesting that there is greater genetic diversity within this species than its current taxonomy reflects. A full accounting of the biodiversity of the genus awaits further study | ||
| 650 | 4 | |a Journal Article | |
| 650 | 4 | |a Research Support, N.I.H., Extramural | |
| 650 | 4 | |a Research Support, Non-U.S. Gov't | |
| 650 | 7 | |a DNA, Mitochondrial |2 NLM | |
| 700 | 1 | |a Grose, Michael J |e verfasserin |4 aut | |
| 700 | 1 | |a Clarke, Anna L |e verfasserin |4 aut | |
| 700 | 1 | |a Greenbaum, Eli |e verfasserin |4 aut | |
| 700 | 1 | |a Bonaccorso, Elisa |e verfasserin |4 aut | |
| 700 | 1 | |a Guayasamin, Juan Manuel |e verfasserin |4 aut | |
| 700 | 1 | |a Smith-Pardo, Allan H |e verfasserin |4 aut | |
| 700 | 1 | |a Benz, Brett W |e verfasserin |4 aut | |
| 700 | 1 | |a Harris, Bethany R |e verfasserin |4 aut | |
| 700 | 1 | |a Siegfreid, Eric |e verfasserin |4 aut | |
| 700 | 1 | |a Reid, Yana R |e verfasserin |4 aut | |
| 700 | 1 | |a Holcroft-Benson, Nancy |e verfasserin |4 aut | |
| 700 | 1 | |a Wiley, Edward O |e verfasserin |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t Molecular phylogenetics and evolution |d 1993 |g 42(2007), 2 vom: 15. Feb., Seite 287-97 |w (DE-627)NLM013242059 |x 1095-9513 |7 nnns |
| 773 | 1 | 8 | |g volume:42 |g year:2007 |g number:2 |g day:15 |g month:02 |g pages:287-97 |
| 912 | |a GBV_USEFLAG_A | ||
| 912 | |a GBV_NLM | ||
| 951 | |a AR | ||
| 952 | |d 42 |j 2007 |e 2 |b 15 |c 02 |h 287-97 | ||