A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma
BACKGROUND: Lung adenocarcinoma (LUAD) is a heterogeneous disease characterized by high mortality and poor prognosis. Ferroptosis, a newly discovered iron-dependent type of cell death, has been found to play a crucial role in the development of cancers. However, little is known about the prognostic value of ferroptosis-related genes (FRGs) in LUAD.
METHODS: In the present study, RNA-seq transcriptome data of LUAD patients were obtained from The Cancer Genome Atlas (TCGA) database. Cox regression analysis was used to construct a multigene signature. Kaplan-Meier survival and receiver operating characteristic (ROC) curves were utilized to assess the prognostic prediction efficiency of the constructed survival model. LUAD patients from the GSE30219 dataset were used for validation.
RESULTS: We found 46 differentially expressed FRGs between LUAD and adjacent normal tissues. Via univariate and multivariate Cox regression analyses, 5 differentially expressed FRGs were identified as being highly correlated with LUAD. Patients were divided into low- and high-risk groups according to the risk score. We found that the overall survival (OS) of patients in the high-risk group was significantly worse than that of their low-risk counterparts. (P < 0.0001 in the TCGA dataset and P = 0.044 in the GSE30219 cohort). In addition, gene set variation analysis (GSVA) of the tumor microenvironment of the two groups may explain the different survival of LUAD patients.
CONCLUSIONS: Our study identified a novel FRG signature that could be used to evaluate and predict the prognosis of LUAD patients, which might provide a new therapeutic target for the treatment of LUAD patients.
| Medienart: |
E-Artikel |
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| Erscheinungsjahr: |
2021 |
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| Erschienen: |
2021 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:13 |
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| Enthalten in: |
Aging - 13(2021), 12 vom: 11. Juni, Seite 16144-16164 |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Jin, Jingjing [VerfasserIn] |
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| Links: |
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| Themen: |
FRGs |
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| Anmerkungen: |
Date Completed 20.07.2021 Date Revised 20.07.2021 published: Print-Electronic Citation Status MEDLINE |
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| doi: |
10.18632/aging.203140 |
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| funding: |
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| Förderinstitution / Projekttitel: |
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| PPN (Katalog-ID): |
NLM326635580 |
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| 100 | 1 | |a Jin, Jingjing |e verfasserin |4 aut | |
| 245 | 1 | 2 | |a A novel ferroptosis-related gene signature for prognostic prediction of patients with lung adenocarcinoma |
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| 500 | |a Date Revised 20.07.2021 | ||
| 500 | |a published: Print-Electronic | ||
| 500 | |a Citation Status MEDLINE | ||
| 520 | |a BACKGROUND: Lung adenocarcinoma (LUAD) is a heterogeneous disease characterized by high mortality and poor prognosis. Ferroptosis, a newly discovered iron-dependent type of cell death, has been found to play a crucial role in the development of cancers. However, little is known about the prognostic value of ferroptosis-related genes (FRGs) in LUAD | ||
| 520 | |a METHODS: In the present study, RNA-seq transcriptome data of LUAD patients were obtained from The Cancer Genome Atlas (TCGA) database. Cox regression analysis was used to construct a multigene signature. Kaplan-Meier survival and receiver operating characteristic (ROC) curves were utilized to assess the prognostic prediction efficiency of the constructed survival model. LUAD patients from the GSE30219 dataset were used for validation | ||
| 520 | |a RESULTS: We found 46 differentially expressed FRGs between LUAD and adjacent normal tissues. Via univariate and multivariate Cox regression analyses, 5 differentially expressed FRGs were identified as being highly correlated with LUAD. Patients were divided into low- and high-risk groups according to the risk score. We found that the overall survival (OS) of patients in the high-risk group was significantly worse than that of their low-risk counterparts. (P < 0.0001 in the TCGA dataset and P = 0.044 in the GSE30219 cohort). In addition, gene set variation analysis (GSVA) of the tumor microenvironment of the two groups may explain the different survival of LUAD patients | ||
| 520 | |a CONCLUSIONS: Our study identified a novel FRG signature that could be used to evaluate and predict the prognosis of LUAD patients, which might provide a new therapeutic target for the treatment of LUAD patients | ||
| 650 | 4 | |a Journal Article | |
| 650 | 4 | |a Research Support, Non-U.S. Gov't | |
| 650 | 4 | |a FRGs | |
| 650 | 4 | |a ferroptosis | |
| 650 | 4 | |a lung adenocarcinoma (LUAD) | |
| 650 | 4 | |a prognosis | |
| 700 | 1 | |a Liu, Chuan |e verfasserin |4 aut | |
| 700 | 1 | |a Yu, Shanshan |e verfasserin |4 aut | |
| 700 | 1 | |a Cai, Lingyi |e verfasserin |4 aut | |
| 700 | 1 | |a Sitrakiniaina, Andriamifahimanjaka |e verfasserin |4 aut | |
| 700 | 1 | |a Gu, Ruihong |e verfasserin |4 aut | |
| 700 | 1 | |a Li, Wenfeng |e verfasserin |4 aut | |
| 700 | 1 | |a Wu, Fangfang |e verfasserin |4 aut | |
| 700 | 1 | |a Xue, Xiangyang |e verfasserin |4 aut | |
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