Complete mitochondrial genome of Sri Lankan Junglefowl (Gallus lafayetti) and phylogenetic study
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group..
The complete mitochondrial genomes of two Sri Lankan junglefowl (Gallus lafayetti: CJF) individuals were sequenced by using next-generation sequencing technique. Samples were collected from Rathnapura and Pelmadulla areas in Sri Lanka. The complete mitochondrial DNA is 16,839 bp in length, with a typical mitogenome structure composed of a non-coding control region, 22 tRNA, two rRNA, and 13 protein-coding genes. Overall base composition is 30% A, 23.9% T, 32.3% C, and 13.6% G indicating high content of 54.0% A + T for both individuals. Phylogenetic analysis reveals that CJF samples cluster with the clade of the green junglefowl (Gallus varius) and red junglefowl (Gallus gallus) than to grey junglefowl (Gallus sonerattii: GyJF). This result can be subsequently used to provide essential information for junglefowl evolution.
| Medienart: |
E-Artikel |
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| Erscheinungsjahr: |
2018 |
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| Erschienen: |
2018 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:3 |
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| Enthalten in: |
Mitochondrial DNA. Part B, Resources - 3(2018), 1 vom: 05. Jan., Seite 83-84 |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Hirimuthugoda, Nalini Yasoda [VerfasserIn] |
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| Links: |
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| Themen: |
Journal Article |
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| Anmerkungen: |
Date Revised 22.01.2021 published: Electronic Citation Status PubMed-not-MEDLINE |
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| doi: |
10.1080/23802359.2017.1422409 |
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| funding: |
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| Förderinstitution / Projekttitel: |
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| PPN (Katalog-ID): |
NLM320364240 |
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| 500 | |a Citation Status PubMed-not-MEDLINE | ||
| 520 | |a © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. | ||
| 520 | |a The complete mitochondrial genomes of two Sri Lankan junglefowl (Gallus lafayetti: CJF) individuals were sequenced by using next-generation sequencing technique. Samples were collected from Rathnapura and Pelmadulla areas in Sri Lanka. The complete mitochondrial DNA is 16,839 bp in length, with a typical mitogenome structure composed of a non-coding control region, 22 tRNA, two rRNA, and 13 protein-coding genes. Overall base composition is 30% A, 23.9% T, 32.3% C, and 13.6% G indicating high content of 54.0% A + T for both individuals. Phylogenetic analysis reveals that CJF samples cluster with the clade of the green junglefowl (Gallus varius) and red junglefowl (Gallus gallus) than to grey junglefowl (Gallus sonerattii: GyJF). This result can be subsequently used to provide essential information for junglefowl evolution | ||
| 650 | 4 | |a Journal Article | |
| 650 | 4 | |a Mitochondrial DNA | |
| 650 | 4 | |a Sri Lankan junglefowl | |
| 650 | 4 | |a next-generation sequencing | |
| 650 | 4 | |a phylogenetic analysis | |
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| 700 | 1 | |a Chen, Xing |e verfasserin |4 aut | |
| 700 | 1 | |a Perera, Patthamesthrige Wimal Anthony |e verfasserin |4 aut | |
| 700 | 1 | |a Gunawardena, Weligalle Wedarallage Dewar Asoka |e verfasserin |4 aut | |
| 700 | 1 | |a Gunwardana, Humpita Gamaralalage Thilini Nisanka |e verfasserin |4 aut | |
| 700 | 1 | |a Yin, Ting-Ting |e verfasserin |4 aut | |
| 700 | 1 | |a Wang, Ming-Shan |e verfasserin |4 aut | |
| 700 | 1 | |a Li, Gui-Mei |e verfasserin |4 aut | |
| 700 | 1 | |a Peng, Min-Sheng |e verfasserin |4 aut | |
| 700 | 1 | |a Zhang, Ya-Ping |e verfasserin |4 aut | |
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