AlignmentViewer : Sequence Analysis of Large Protein Families
Copyright: © 2020 Reguant R et al..
AlignmentViewer is a web-based tool to view and analyze multiple sequence alignments of protein families. The particular strengths of AlignmentViewer include flexible visualization at different scales as well as analysis of conservation patterns and of the distribution of proteins in sequence space. The tool is directly accessible in web browsers without the need for software installation. It can handle protein families with tens of thousands of sequences and is particularly suitable for evolutionary coupling analysis, e.g. via EVcouplings.org.
| Medienart: |
E-Artikel |
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| Erscheinungsjahr: |
2020 |
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| Erschienen: |
2020 |
| Enthalten in: |
Zur Gesamtaufnahme - volume:9 |
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| Enthalten in: |
F1000Research - 9(2020) vom: 28. |
| Sprache: |
Englisch |
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| Beteiligte Personen: |
Reguant, Roc [VerfasserIn] |
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| Links: |
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| Themen: |
Alignment viewer |
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| Anmerkungen: |
Date Completed 01.02.2021 Date Revised 24.11.2021 published: Electronic-eCollection Citation Status MEDLINE |
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| doi: |
10.12688/f1000research.22242.2 |
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| funding: |
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| Förderinstitution / Projekttitel: |
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| PPN (Katalog-ID): |
NLM316918709 |
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| 500 | |a published: Electronic-eCollection | ||
| 500 | |a Citation Status MEDLINE | ||
| 520 | |a Copyright: © 2020 Reguant R et al. | ||
| 520 | |a AlignmentViewer is a web-based tool to view and analyze multiple sequence alignments of protein families. The particular strengths of AlignmentViewer include flexible visualization at different scales as well as analysis of conservation patterns and of the distribution of proteins in sequence space. The tool is directly accessible in web browsers without the need for software installation. It can handle protein families with tens of thousands of sequences and is particularly suitable for evolutionary coupling analysis, e.g. via EVcouplings.org | ||
| 650 | 4 | |a Journal Article | |
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| 650 | 4 | |a Research Support, Non-U.S. Gov't | |
| 650 | 4 | |a JavaScript | |
| 650 | 4 | |a MSA | |
| 650 | 4 | |a alignment viewer | |
| 650 | 4 | |a protein alignments | |
| 650 | 4 | |a tool | |
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| 700 | 1 | |a Antipin, Yevgeniy |e verfasserin |4 aut | |
| 700 | 1 | |a Sheridan, Rob |e verfasserin |4 aut | |
| 700 | 1 | |a Dallago, Christian |e verfasserin |4 aut | |
| 700 | 1 | |a Diamantoukos, Drew |e verfasserin |4 aut | |
| 700 | 1 | |a Luna, Augustin |e verfasserin |4 aut | |
| 700 | 1 | |a Sander, Chris |e verfasserin |4 aut | |
| 700 | 1 | |a Gauthier, Nicholas Paul |e verfasserin |4 aut | |
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