A blueprint for academic laboratories to produce SARS-CoV-2 quantitative RT-PCR test kits

© 2020 Mascuch et al..

Widespread testing for the presence of the novel coronavirus severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in individuals remains vital for controlling the COVID-19 pandemic prior to the advent of an effective treatment. Challenges in testing can be traced to an initial shortage of supplies, expertise, and/or instrumentation necessary to detect the virus by quantitative RT-PCR (RT-qPCR), the most robust, sensitive, and specific assay currently available. Here we show that academic biochemistry and molecular biology laboratories equipped with appropriate expertise and infrastructure can replicate commercially available SARS-CoV-2 RT-qPCR test kits and backfill pipeline shortages. The Georgia Tech COVID-19 Test Kit Support Group, composed of faculty, staff, and trainees across the biotechnology quad at Georgia Institute of Technology, synthesized multiplexed primers and probes and formulated a master mix composed of enzymes and proteins produced in-house. Our in-house kit compares favorably with a commercial product used for diagnostic testing. We also developed an environmental testing protocol to readily monitor surfaces for the presence of SARS-CoV-2. Our blueprint should be readily reproducible by research teams at other institutions, and our protocols may be modified and adapted to enable SARS-CoV-2 detection in more resource-limited settings.

Errataetall:

UpdateOf: medRxiv. 2020 Jul 31;:. - PMID 32766604

Medienart:

E-Artikel

Erscheinungsjahr:

2020

Erschienen:

2020

Enthalten in:

Zur Gesamtaufnahme - volume:295

Enthalten in:

The Journal of biological chemistry - 295(2020), 46 vom: 13. Nov., Seite 15438-15453

Sprache:

Englisch

Beteiligte Personen:

Mascuch, Samantha J [VerfasserIn]
Fakhretaha-Aval, Sara [VerfasserIn]
Bowman, Jessica C [VerfasserIn]
Ma, Minh Thu H [VerfasserIn]
Thomas, Gwendell [VerfasserIn]
Bommarius, Bettina [VerfasserIn]
Ito, Chieri [VerfasserIn]
Zhao, Liangjun [VerfasserIn]
Newnam, Gary P [VerfasserIn]
Matange, Kavita R [VerfasserIn]
Thapa, Hem R [VerfasserIn]
Barlow, Brett [VerfasserIn]
Donegan, Rebecca K [VerfasserIn]
Nguyen, Nguyet A [VerfasserIn]
Saccuzzo, Emily G [VerfasserIn]
Obianyor, Chiamaka T [VerfasserIn]
Karunakaran, Suneesh C [VerfasserIn]
Pollet, Pamela [VerfasserIn]
Rothschild-Mancinelli, Brooke [VerfasserIn]
Mestre-Fos, Santi [VerfasserIn]
Guth-Metzler, Rebecca [VerfasserIn]
Bryksin, Anton V [VerfasserIn]
Petrov, Anton S [VerfasserIn]
Hazell, Mallory [VerfasserIn]
Ibberson, Carolyn B [VerfasserIn]
Penev, Petar I [VerfasserIn]
Mannino, Robert G [VerfasserIn]
Lam, Wilbur A [VerfasserIn]
Garcia, Andrés J [VerfasserIn]
Kubanek, Julia [VerfasserIn]
Agarwal, Vinayak [VerfasserIn]
Hud, Nicholas V [VerfasserIn]
Glass, Jennifer B [VerfasserIn]
Williams, Loren Dean [VerfasserIn]
Lieberman, Raquel L [VerfasserIn]

Links:

Volltext

Themen:

Coronavirus
DNA polymerase
Formulation
Infectious disease
Journal Article
Polymerase chain reaction (PCR)
Protein purification
RNA
RT-qPCR
Reagent Kits, Diagnostic
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Reverse transcriptase
Reverse transcription
Ribonuclease inhibitor
SARS-CoV-2
Virus

Anmerkungen:

Date Completed 07.12.2020

Date Revised 16.02.2024

published: Print-Electronic

UpdateOf: medRxiv. 2020 Jul 31;:. - PMID 32766604

Citation Status MEDLINE

doi:

10.1074/jbc.RA120.015434

funding:

Förderinstitution / Projekttitel:

PPN (Katalog-ID):

NLM314566538